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             BMB 645  Presentation in Gautier 118
Descriptions of Graduate Courses offered by Program in Biochemistry
          & Molecular Biology
Fall Semester 2008 Course Descriptions
COURSE:
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SECTION:
601
Harris
1
W
12:00-1:00 p.m.
GTR-118
EY
JOURNAL CLUB/SEMINAR. All registered BMB graduate students must participate in the Journal Club/Seminar. Students are required to critically review published paper(s) of their choice and describe in detail the findings described therein.
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SECTION:
609
Rudd
3
TR
11:00-12:30 p.m.
GTR-118
O1
ADVANCED BIOCHEMISTRY AND MOLECULAR BIOLOGY. This course is a continuation course for BMB 616. It covers essentially the same topics as BMB 616 but at a more advanced level. It brings the student to the forefront of research in Molecular Biology. The course material is discussed exclusively in the form of original research papers. Based on this experience, students are required to propose experimental approaches to biological problems and defend them. Prerequisite: BMB 616.
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SECTION:
610
Briegel
2
R
3:00-5:00 p.m.
GTR-118
01
Advanced Topics in Biochemistry.
(Cancer Genetics)

This course explores the genetic pathways controlling cancer development. Topics include cancer susceptibility, oncogenesis, tumor suppression, genome surveillance, invasion and metastasis, signaling and development, cancer stem cells and cancer genomics.

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SECTION:
614
Scott
3
MWF
10:15-11:15 a.m.
GTR-118
01
MOLECULAR GENETICS . This course deals with mechanisms of inheritance with particular emphasis
on fundamental genetic processes in bacteria, bacteriophage, fungi, and animal viruses. Topics include the nature of mutations and mechanisms of mutagenesis, genetic complementation, recombination, transposition, transcriptional and post-transcriptional regulation, yeast and other fungi as tools for eukaryotic molecular biology, human genetic analysis, and genetic mechanisms in bacterial and mammalian viruses. Prerequisite: BMB 506 or equivalent or permission of instructor.
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SECTION:
617
Deutscher
1
T
1:00-2:30 p.m.
GTR-118
01
READINGS IN MOLECULAR BIOLOGY. Discussion of classical papers in molecular biology beginning with the concept of the gene and continuing into modern studies. Format consists of student
presentations and group discussions. Prerequisite: BMB 506 or equivalent, or permission of instructor.
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SECTION:
631
Harris
1-3
TBA
TBA
TBA
O1
SPECIAL WORK. Special work, lecture, or laboratory or a combination of these, as determined by advisor in accord with student's individual interest. Prerequisite: Approval of Operating Committee.
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645
Harris
2-3
TBA
TBA
TBA
01
RESEARCH PROBLEMS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY. Laboratory research problems in various areas of biochemistry and molecular biology, including literature search, experimental design, data gathering and evaluation of results. This course is the mechanism by which graduate laboratory rotations will be done in preparation for selection of Ph.D. mentor. Prerequisite(s) BMB 506 or equivalent or permission of instructor.
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710
Harris
1-6
ARR
ARR
01
MASTER THESIS. The requirements are 30 credits at the graduate level; a thesis showing results obtained during work on a research problem, for which six credits will be earned; a written comprehensive examination covering the entire field of biochemistry; an oral defense of the thesis. Credit is not awarded until the thesis has been accepted.
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720
Harris
0
ARR
ARR
01
RESEARCH IN RESIDENCE. Used to establish research in residence for the thesis for the master's degree after the student has enrolled for the permissible cumulative total in BMB 710 (usually six credits). Credit not granted. May be regarded as full time residence.
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730
Harris
1-12
ARR
ARR
01
RESEARCH IN RESIDENCE. Used to establish research in residence for the Ph.D., after the student has been enrolled for the permissible cumulative total in appropriate doctoral research. Credit not granted. May be regarded as a full-time residence as determined by the Dean of the Graduate School.
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SECTION:
750
Harris
0
ARR
ARR
01
RESEARCH IN RESIDENCE. Used to establish research in residence for the Ph.D., after the student has been enrolled for the permissible cumulative total in appropriate doctoral research. Credit not granted. May be regarded as a full-time residence as determined by the Dean of the Graduate School.
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IBS 601
Lichtenheld
5
MTWRF
ARR
01
Interdisciplinary Biomedical Studies I. An interdisciplinary survey of molecular and cellular biology. Topics include protein structure and function, protein synthesis, nucleic acids, genetic code, gene technology, genetic analysis, control of cellular activity, molecular anatomy of genes and chromosomes, DNA replication, repair, and recombination, regulation of transcription, RNA processing, and post-transcriptional control. Prerequisite: Permission of the instructor.
Spring Semester 2008 Course Descriptions

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601
Werner
1
W
12:00-1:00 p.m.
GTR-118
DY
JOURNAL CLUB/SEMINAR. All registered BMB graduate students must participate in the Journal Club/Seminar. Students are required to critically review published paper(s) of their choice and describe in detail the findings described therein.

COURSE:
INSTRUCTOR:
CREDITS:

DAYS:
TIME:
ROOM:

SECTION:

610
Myers
2
TR
4:30-6:00 p.m.
GTR-118
01
Advanced Topics in Biochemistry.
(Molecular Evolution)

Senior seminars designed to cover in depth recent developments in the field of biochemistry with the purpose of keeping advanced graduate students abrest with new theoretical and experimental findings. General subjects such as mechanisms of enzyme action, oxidative phosphorylation, active transport, metabolic controls and disorders, steroid biochemistry, and biochemical genetics are discussed. The detailed program is announced annually. Majors in Biochemistry and Molecular Biology are expected to take this course each semester in their second and third years.
Prerequisite: BMB 506 and departmental permission.
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615
Fenna
4
MWF
10:20-11:30 a.m.
GTR-118
01
STRUCTURE AND FUNCTION OF BIOLOGICAL MACROMOLECULES. The structure and function of proteins and their complexes with nucleic acids, carbohydrates, and lipids. Various biophysical methods used to investigate structure-function relationships are introduced and their applications illustrated by specific examples. Prerequisite: BMB 506 or equivalent, or permission of the instructor.
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SECTION:
631
Werner
1-3
TBA
TBA
TBA
O1
SPECIAL WORK. Special work, lecture, or laboratory or a combination of these, as determined by advisor in accord with student's individual interest.
Prerequisite: Approval of Committee.
COURSE:
INSTRUCTOR:
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DAYS:
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ROOM:

SECTION:
645
Werner
2-3
TBA
TBA
TBA
01
RESEARCH PROBLEMS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY. Laboratory research problems in various areas of biochemistry and molecular biology, including literature search, experimental design, data gathering and evaluation of results. This course is the mechanism by which graduate laboratory rotations will be done in preparation for selection of Ph.D. mentor. Prerequisite(s) BMB 506 or equivalent or permission of instructor.
COURSE:
INSTRUCTOR:
CREDITS:

DAYS:
ROOM:
SECTION:
730
Werner
1-12
ARR
ARR
01
RESEARCH IN RESIDENCE. Used to establish research in residence for the Ph.D., after the student has been enrolled for the permissible cumulative total in appropriate doctoral research. Credit not granted. May be regarded as a full-time residence as determined by the Dean of the Graduate School.
COURSE:
INSTRUCTOR:
CREDITS:

DAYS:
ROOM:
SECTION:
750
Werner
0
ARR
ARR
01
RESEARCH IN RESIDENCE. Used to establish research in residence for the Ph.D., after the student has been enrolled for the permissible cumulative total in appropriate doctoral research. Credit not granted. May be regarded as a full-time residence as determined by the Dean of the Graduate School.
COURSE:
INSTRUCTOR:
CREDITS:

DAYS:
ROOM:
SECTION:
IBS 603
Lichtenheld
4 (1 per module)
ARR
ARR
01

Interdisciplinary Biomedical Studies II.
Module 1:
This module dissects at the molecular level how extracellular signals initiate intracellular signaling pathways. Specific examples include G-protein signaling, signaling through tyrosine and serine/threonine phosphorylation as well as lipid and calcium mediated signaling. Finally, it will be discussed how growth factor signals communicate with the nucleus to promote cell cycle progression. The class includes two sessions in which primary research papers are discussed and one final written exam.

Module 2: This module dissects at the molecular level the biophysics of cell membranes and channels. Specific examples include the discussion of the architecture of cell membranes, and how cell volume and intracellular calcium levels are
controlled. Active and passive transport systems, their role
in mitochondrial function as well as the structure and
function of ion channels will be covered as well. The
molecular properties of channels and transporters are
discussed with respect to their effect on the electrical
properties of cells. The class includes two sessions in
which primary research papers are discussed and one written
final exam.
Module 3: This module dissects mammalian development at the molecular level and introduces the developmentally controlled mechanisms of the immune system that generates immune specificity and diversity. Examples for the first half of
this module include the specification of germ cells and sex
as well as the role of programmed cell death and its
mechanisms. The immunological component of the module
discusses immune system specific mechanisms of dna
recombination, the structure and function of antibodies and
their application in techniques used in the life sciences.
Finally, basic principles guiding the functions of lymphoid
cells and organs are discussed.
Module 4: This module applies interdisciplinary concepts of the life sciences to discuss the cause and therapy of human disease. Based on the relevance of genetics for the molecular
understanding and diagnosis of human diseas, the first
lectures explore yeast models for human disease. This bridge
the previous ibs coursework to the theme of this module.
The remaining sessions address topics ranging from stemcells
to molecular mechanisms of diabetes, aging and cardiac or
neurodegenerative diseases using primary literature. The
specific topics covering two to four lectures and discussion
will be announced. The students are graded based on their
composition of a 2-page essay, "news and views" format.

 

Our program requires registration for 3 modules as a minimum.


Key to Room abbreviations and locations:

GTR
RMSB
TBA
ARR

 

 
Gautier Bldg., Medical Campus
Rosenstiel Medical Science Bldg. Medical Campus
To Be Announced
To Be Arranged